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2009. “Differences in growth, morphology, tissue carbon and nitrogen of Macrocystis pyrifera within and at the outer edge of a giant kelp forest in California, USA” 375: 101-112.
2009. “Sediment yield from the tectonically active semiarid Western Transverse Ranges of California” 121: 1054-1070.
2008. “Scales of dispersal and the biogeography of marine predator-prey interactions” 171: 405-417.
DeAngelis, D.L.;Trexler, J.C.;Donalson, D.D.  Ruan, S. 2010. “Competition dynamics in a seasonally varying wetland” : 1-14.
Trexler, J.C.;Gaiser, E.E.;Kominoski, J.  Ogram, A. 2015. “The Role of Periphyton Mats in Consumer Community Structure and Function in Calcareous Wetlands: Lessons from the Everglades” : 155-179.
Baggett, L.P.;Heck, K.L., Jr.;Frankovich, T.A.;Armitage, A.R.;Fourqurean, J.W. 2013. “Stoichiometry, growth, and fecundity responses to nutrient enrichment by invertebrate grazers in sub-tropical turtlegrass (Thalassia testudinum) meadows” 160 (1): 169-180. doi:10.1007/s00227-012-2075-6.
Barr, J.G.;Fuentes, J.D.;O'Halloran, T.L.;Barr, D.;Zieman, J.C. 2006. “Carbon assimilation by mangrove forests in the Florida Everglades” 1: 27-37.
Boucek, R.;Rehage, J.S. 2014. “Examining the Effectiveness of Consumer Diet Sampling as a Nonnative Detection Tool in a Subtropical Estuary” 143 (2): 489-494. doi:10.1080/00028487.2013.862180.
Boyer, J.N. 2006. “Shifting N and P limitation along a north-south gradient of mangrove estuaries in South Florida” 569 (1): 167-177. doi:10.1007/s10750-006-0130-3.
Breithaupt, J.L.;Smoak, J.M.;Smith, T.J.;Saunders, C.J. 2014. “Temporal variability of carbon and nutrient burial, sediment accretion, and mass accumulation over the past century in a carbonate platform mangrove forest of the Florida Everglades” 119: 2032-2048. doi:10.1002/2014JG002715.
Briceno, H.O.;Miller, G.;Davis, S.E. 2014. “Relating freshwater flow with estuarine water quality in the southern Everglades mangrove ecotone” 34 (Suppl 1): 101-111. doi:10.1007/s13157-013-0430-0.
Brody, S.D.;Davis, S.E.;Highfield, W.E.;Bernhardt, S.P. 2008. “A Spatial-Temporal Analysis of Section 404 Wetland Permitting in Texas and Florida: Thirteen Years of Impact Along the Coast” 28 (1): 107-116. doi:10.1672/07-90.1.
Koch, G.;Childers, D.L.;Staehr, P.A.;Price, R.M.;Davis, S.E.;Gaiser, E.E. 2012. “Hydrological Conditions Control P Loading and Aquatic Metabolism in an Oligotrophic, Subtropical Estuary” 35 (1): 292-307. doi:10.1007/s12237-011-9431-5.
Davis, S.E.;Childers, D.L.;Noe, G.B. 2006. “The contribution of leaching to the rapid release of nutrients and carbon in the early decay of wetland vegetation” 569 (1): 87-97. doi:10.1007/s10750-006-0124-1.
Dodds, W.;Robinson, C.;Gaiser, E.E.;Hansen, G.;Powell, H.;Smith, J.;Morse, N.;Gregory, S.;Bell, T.;Kratz, T.;McDowell, W.H. 2012. “Surprises and Insights from Long-Term Aquatic Datasets and Experiments” 62: 709-721.
Doren, R.F.;Trexler, J.C.;Gottlieb, A.D.;Harwell, M. 2009. “Ecological Indicators for System-wide Assessment of the Greater Everglades Ecosystem Restoration Program” 9 (6): S2-S16. doi:10.1016/j.ecolind.2008.08.009.
Doren, R.F. 2009. “Editorial” 9 (6): S1. doi:10.1016/j.ecolind.2008.08.009.
Doren, R.F.;Volin, J.C.;Richards, J.H. 2009. “Invasive exotic plant indicators for ecosystem restoration: An example from the Everglades restoration program” 9 (6): S29-S36. doi:10.1016/j.ecolind.2008.08.006.
2008. “Processing of allochthonous macrophyte subsidies by sandy beach consumers: estimates of feeding rates and impacts on food resources” 154: 163-174.
2009. “Biological effects within no-take marine reserves: a global synthesis” 384: 181-190.