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Fitt, W. K. ;Gates, R. D. ;Hoegh-Guldberg, O. ;Bythell, J. C. ;Jatkar, A. ;Grottoli, A. G. ;Gomez, M. ;Fisher, P. ;Lajuenesse, T. C. ;Pantos, O. ;Iglesias-Prieto, R. ;Franklin, D. J. ;Rodrigues, L. J. ;Torregiani, J. M. ;van Woesik, R. ;Lesser, M. P. 2009. Response of two species of Indo-Pacific corals, Porites cylindrica and Stylophora pistillata, to short-term thermal stress: The host does matter in determining the tolerance of corals to bleaching 373 (2): 102-110. doi:10.1016/j.jembe.2009.03.011. ://000266897400004.
Fountain, T. ;Tilak, S. ;Shin, P. ;Holbrook, S. J. ;Schmitt, R. J. ;Brooks, A. J. ;Washburn, L. ;Salazar, D. 2009. Digital Moorea cyberinfrastructure for coral reef monitoring
Goldenheim, W. M. 2009. The effects of flow and temperature over multiple time scales on scleractinian growth and photo-physiology in Moorea, French Polynesia M.Sc.: .
Hedouin, L. ;Reichelt-Brushett, A. J. ;Gates, R. D. 2009. Assessment of metals and a metalloid in sediments from Hawaiian coral reef ecosystems. 58: 1759-1765.
Kane, C. N. ;Brooks, A. J. ;Holbrook, S. J. ;Schmitt, R. J. 2009. The role of microhabitat preference and social organization in determining the spatial distribution of a coral reef fish 84 (1): 1-10. doi:10.1007/s10641-008-9377-z. ://000261967800001.
Leray, M.;Beldade, R.;Holbrook, S. J.;Schmitt, R. J.;Planes, S.;Bernardi, G. 2009. Isolation and characterization of 13 polymorphic nuclear microsatellite primers for the widespread Indo-Pacific three-spot damselfish, Dascyllus trimaculatus, and closely related D. auripinnis 9 (1): 213-215. doi:10.1111/j.1755-0998.2008.02380.x. ://000262678900047.
Mayfield, A. B. ;Hirst, M. B. ;Gates, R. D. 2009. Gene expression normalization in a dual-compartment system: a real-time quantitative polymerase chain reaction protocol for symbiotic anthozoans 9 (2): 462-470. doi:10.1111/j.1755-0998.2008.02349.x. ://000263333100003.
Muehllehner, N.;Edmunds, P. J.  Kleypas, J.; Horst, J. 2009. Effects of ocean acidification and increased temperature on skeletal growth of two scleractinian corals, Pocillopora meandrina and Porites rus : 57-61.
Muller, E. B.;Doyle, F. J.;Nisbet, R. M.;Edmunds, P.;Kooijman, S. 2009. Dynamic energy budgets of syntrophic symbiotic relationships between heterotrophic hosts and photoautotrophic symbionts 153A: S145-S145. doi:10.1016/j.cbpa.2009.04.275.
Muller, E. B.;Kooijman, Salm;Edmunds, P. J.;Doyle, F. J.;Nisbet, R. M. 2009. Dynamic energy budgets in syntrophic symbiotic relationships between heterotrophic hosts and photoautotrophic symbionts 259 (1): 44-57. doi:10.1016/j.jtbi.2009.03.004. ://000267084400006.
Olson, N. D. ;Ainsworth, T. D. ;Gates, R. D. ;Takabayashi, M. 2009. Diazotrophic bacteria associated with Hawaiian Montipora corals: Diversity and abundance in correlation with symbiotic dinoflagellates 371 (2): 140-146. doi:10.1016/j.jembe.2009.01.012. ://000265466200005.
Palmer, C. V. ;Roth, M. S. ;Gates, R. D. 2009. Red Fluorescent Protein Responsible for Pigmentation in Trematode-Infected Porites compressa Tissues 216 (1): 68-74. ://000263442100007.
Poray, A. K. 2009. Spatial escape at a physiological cost: consequences for coral reef macroalgae inhabiting refugia from herbivores. M.Sc.: .
Putnam, H. M. ;Edmunds, P. J.  Brown, B. E.; Hagan, A. 2009. Responses of coral hosts and their algal symbionts to thermal heterogeneity : 393-397.
Schmitt, R. J. ;Holbrook, S. J. ;Brooks, A. J. ;Lape, J. C. P. 2009. Intraguild predation in a structured habitat: distinguishing multiple-predator effects from competitor effects 90 (9): 2434-2443. ://000269025700012.
Spitler, M. I. 2009. Factors influencing the distribution and abundance of the dominant macroalgal species on coral reefs in Moorea, French Polynesia. M.Sc.: .
Stat, M. ;Pochon, X. ;Cowie, R. O. M. ;Gates, R. D. 2009. Specificity in communities of Symbiodinium in corals from Johnston Atoll 386: 83-96. doi:10.3354/meps08080. ://000268552500007.
Stier, A. C. ;Steele, M. A. ;Brooks, A. J. 2009. Coral reef fishes use crown-of-thorns seastar as habitat 28 (1): 227-227. doi:10.1007/s00338-008-0445-9. ://000263071800029.
Hench, J. L. ;Leichter, J. J. ;Monismith, S. G. 2008. Episodic circulation and exchange in a wave-driven coral reef and lagoon system 53 (6): 2681-2694. ://000261355500029.
Holbrook, S. J.;Brooks, A. J.;Schmitt, R. J.;Stewart, H. L. 2008. Effects of sheltering fish on growth of their host corals 155 (5): 521-530. doi:10.1007/s00227-008-1051-7. ://000259276300006.