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Henshaw, Donald L.;Stubbs, Maryan;Benson, Barbara J.;Baker, Karen S.;Blodgett, Darrell;Porter, John H. 1998. “Climate database project: a strategy for improving information access across research sites” : 123-127.
Smith, Raymond C.;Baker, Karen S.;Dierssen, Heidi M.;Stammerjohn, Sharon E.;Vernet, Maria 2000. “Bio-optical modeling of primary production from seawifs ocean color data for the Western Antarctic Peninsula region”
Dierssen, Heidi M.;Smith, Raymond C. 2000. “Case 2 Antarctic coastal waters: The bio-optical properties of surface meltwater”
Baker, Karen S.;Gold, Anna Keller;Sudholt, Frank 2003. “FLOW: co-constructing low barrier repository infrastructure in support of heterogeneous knowledge collection(s)” : 397.
Gold, Anna Keller;Baker, Karen S.;LeMeur, Jean-Yves;Baldridge, Kim 2002. “Building FLOW: federating libraries on the web” : 287-288.
Brunt, James W.;McCartney, Peter;Baker, Karen S.;Stafford, Susan  Rishe, Naphtali 2002. “The future of ecoinformatics in Long Term Ecological Research” 7: 367-372.
Baker, Karen S.;Brunt, James;Blankman, David  Rishe, Naphtali 2002. “Organizational informatics: site description directories for research networks” 7: 355-360.
Melendez-Colom, Eda C.;Baker, Karen S.  Rishe, Naphtali 2002. “Common information management framework: in practice” 7: 385-389.
Baker, Karen S.;Bowker, Geoffrey;Karasti, Helena 2002. “Designing an infrastructure for heterogeneity in ecosystem data, collaborators, and organizations” : 141-144.
Karasti, Helena;Baker, Karen S. 2004. “Infrastructuring for the long-term: ecological information management”
Baker, Karen S.;Ribes, David;Millerand, Florence;Bowker, Geoffrey C. 2005. “Interoperability Strategies for Scientific Cyberinfrastructure: Research and Practice”
Ribes, David;Baker, Karen S.;Millerand, Florence;Bowker, Geoffrey C. 2005. “Comparative Interoperability Project: Configurations of Community, Technology, Organization” : 65-66.
Baker, Karen S.;Jackson, Steve J. 2004. “Ecological Design, Collaborative Care, and Ocean Informatics” 2: .
Baker, Karen S. 2004. “Ecological Design: an interdisciplinary, interactive participation process in an information environment” : 5-7.
Baker, Karen S.;Jackson, Steve J.;Wanetick, Jerry R. 2005. “Strategies Supporting Heterogeneous Data and Interdisciplinary Collaboration: Towards an Ocean Informatics Environment” : 1-10.
Baker, Karen S.;Millerand, Florence 2007. “Scientific infrastructure design: information environments and knowledge provinces”
Ribes, David;Baker, Karen S. 2007. “Modes of Social Science Engagement in Community Information Infrastructure Design” : 107-130.
Baker, Karen S.;Millerand, Florence 2007. “Articulation Work Supporting Information Infrastructure Design: Coordination, Categorization, and Assessment in Practice”
Baker, Karen S.;Stocks, Karen I. 2007. “Building Environmental Information Systems: Myths and Interdisciplinary Lessons”
Montes-Hugo, Martin A.;Reynolds, Rick A.;Vernet, Maria;Stramski, Dariusz;Wright, Vanessa 2007. “Particulate Beam Attenuation Coefficient, Bacteria Abundance and Production in Marine Nearshore Waters” : 66800N.1-66800N.10.